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"Epigenetic"

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Steatotic liver disease

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Editorial

Steatotic liver disease

Citations

Citations to this article as recorded by  Crossref logo
  • Epigenetic Information Loss and Chronosenescence in Liver Aging: From Molecular Mechanisms to Therapeutic Interventions
    Xu Xu, Hui Li, Jiling Li, Min Huang
    The FASEB Journal.2026;[Epub]     CrossRef
  • Correspondence to editorial on “DNA methylome analysis reveals epigenetic alteration of complement genes in advanced metabolic dysfunction-associated steatotic liver disease”
    Amal Magdy, Hee-Jin Kim, Won Kim, Mirang Kim
    Clinical and Molecular Hepatology.2025; 31(1): e70.     CrossRef
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  • 1 Web of Science
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Original Article

Steatotic liver disease

DNA methylome analysis reveals epigenetic alteration of complement genes in advanced metabolic dysfunction-associated steatotic liver disease
Amal Magdy, Hee-Jin Kim, Hanyong Go, Jun Min Lee, Hyun Ahm Sohn, Keeok Haam, Hyo-Jung Jung, Jong-Lyul Park, Taekyeong Yoo, Eun-Soo Kwon, Dong Hyeon Lee, Murim Choi, Keon Wook Kang, Won Kim, Mirang Kim, on behalf of the Innovative Target Exploration of NAFLD (ITEN) Consortium
Clin Mol Hepatol 2024;30(4):824-844.
Published online July 25, 2024
DOI: https://doi.org/10.3350/cmh.2024.0229
Background/Aims
Blocking the complement system is a promising strategy to impede the progression of metabolic dysfunction–associated steatotic liver disease (MASLD). However, the interplay between complement and MASLD remains to be elucidated. This comprehensive approach aimed to investigate the potential association between complement dysregulation and the histological severity of MASLD.
Methods
Liver biopsy specimens were procured from a cohort comprising 106 Korean individuals, which included 31 controls, 17 with isolated steatosis, and 58 with metabolic dysfunction–associated steatohepatitis (MASH). Utilizing the Infinium Methylation EPIC array, thorough analysis of methylation alterations in 61 complement genes was conducted. The expression and methylation of nine complement genes in a murine MASH model were examined using quantitative RT-PCR and pyrosequencing.
Results
Methylome and transcriptome analyses of liver biopsies revealed significant (P<0.05) hypermethylation and downregulation of C1R, C1S, C3, C6, C4BPA, and SERPING1, as well as hypomethylation (P<0.0005) and upregulation (P<0.05) of C5AR1, C7, and CD59, in association with the histological severity of MASLD. Furthermore, DNA methylation and the relative expression of nine complement genes in a MASH diet mouse model aligned with human data.
Conclusions
Our research provides compelling evidence that epigenetic alterations in complement genes correlate with MASLD severity, offering valuable insights into the mechanisms driving MASLD progression, and suggests that inhibiting the function of certain complement proteins may be a promising strategy for managing MASLD.

Citations

Citations to this article as recorded by  Crossref logo
  • NSD2 exacerbates metabolic dysfunction-associated steatotic liver disease progression by suppressing TFEB-mediated autophagy-lysosomal pathway
    Yuan Qiao, Yijia Zhang, Cuiting Sun, Qi Jin, Peng Qu, Zecheng Li, Yang Qiu, Hua Meng, Dantao Peng, Liang Peng
    Metabolism.2026; 174: 156416.     CrossRef
  • Proteomics Insight into the Pathogenic Evolution of Chronic Hepatitis B across Distinct Clinical Stages
    Junhua Xie, Jun Lai, Yanzhe Zhang, Ye Liu, Zhixiang Yan
    Journal of Proteome Research.2026; 25(2): 936.     CrossRef
  • Transcriptional and epigenetic regulation of Ca2+-signaling genes in hepatitis B-derived hepatocellular carcinoma and their association with the cancer hallmarks
    Guadalupe Hernández-Martínez, Andrés Hernández-Oliveras, Ángel Zarain-Herzberg, Juan Santiago-García, Kieran Campbell
    Bioinformatics Advances.2026;[Epub]     CrossRef
  • Editorial: Residual HCC Risk After Hepatitis C Cure—Can Polygenic Risk Scores Refine Surveillance?
    Heechul Nam, Sung Won Lee
    Alimentary Pharmacology & Therapeutics.2026; 63(10): 1427.     CrossRef
  • Diagnostic innovation and models of care to improve fibrosis detection and risk stratification in steatotic liver disease
    Nicola Pugliese, Trenton M. White, Paul N. Brennan, Silvana Pannain, Hannes Hagström, Maurice Michel, Lisa Rice-Duek, Giovanni Targher, Cyrielle Caussy, John F. Dillon, Frank Tacke, Christopher J. Kopka, Giada Sebastiani, Jerome Boursier, Emmanuel A. Tsoc
    The Lancet Regional Health - Europe.2026; 65: 101722.     CrossRef
  • Role of genetic variants and DNA methylation of lipid metabolism-related genes in metabolic dysfunction-associated steatotic liver disease
    Jun-Jie Wang, Xiao-Yuan Chen, Yi-Rong Zhang, Yan Shen, Meng-Lin Zhu, Jun Zhang, Jun-Jie Zhang
    Frontiers in Physiology.2025;[Epub]     CrossRef
  • Uncovering hepatic transcriptomic and circulating proteomic signatures in MASH: A meta-analysis and machine learning-based biomarker discovery
    Elena Cristina Rusu, Helena Clavero-Mestres, Mario Sánchez-Álvarez, Marina Veciana-Molins, Laia Bertran, Pablo Monfort-Lanzas, Carmen Aguilar, Javier Camaron, Teresa Auguet
    Computers in Biology and Medicine.2025; 191: 110170.     CrossRef
  • Sepsis-related immune signature C3 in endometrial carcinoma: implications for prognosis, tumor progression through bioinformatics and experimental validation
    Kulsoom, Wajahat Ali, Saleem Ahmad, Irfan Ali Khan, Tanveen Kaur Soni, Asia Masood, Muhammad Omer Iqbal, Valisher Sapayev Odilbek uglu, Mukhayya Xusinovna Djumaniyazova, Anas Sameed Cholavaram, Mubaraq Arisekola Abdulrahmon
    Molecular Biology Reports.2025;[Epub]     CrossRef
  • Gradual DNA methylation changes reveal transcription factors implicated in metabolic dysfunction-associated steatotic liver disease progression and epigenetic age acceleration
    Evelien Van Dijck, Steven Van Laere, Emilie Logie, Steven Timmermans, Erik Fransen, Joe Ibrahim, Timothy J. Kendall, Jonathan A. Fallowfield, Ligia M. Mateiu, Claude Libert, Guy Van Camp, An Verrijken, Luc Van Gaal, Sven Francque, Wim Van Hul, Wim Vanden
    Clinical Epigenetics.2025;[Epub]     CrossRef
  • Recent progress in histone post-translational modifications as regulators of metabolic diseases: A review
    Aiqiang Zhu, Tong Ye, Minjia Tan, Jun-Yu Xu
    International Journal of Biological Macromolecules.2025; 330: 147964.     CrossRef
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Reply to Correspondence

Viral hepatitis

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Editorial

Review

Viral hepatitis

Unmet needs in the post-direct-acting antivirals era: The risk and molecular mechanisms of hepatocellular carcinoma after hepatitis C virus eradication
Chung-Feng Huang, Manar Hijaze Awad, Meital Gal-Tanamy, Ming-Lung Yu
Clin Mol Hepatol 2024;30(3):326-344.
Published online April 26, 2024
DOI: https://doi.org/10.3350/cmh.2024.0155
Hepatitis C virus (HCV) infection is one of the major etiologies of hepatocellular carcinoma (HCC) with approximately 30% of HCC being due to HCV infection worldwide. HCV eradication by antivirals greatly reduces the risk of HCC; nevertheless, HCC remains to occur in chronic hepatitis C (CHC) patients who have achieved a sustained virological response (SVR). The proportion of post-SVR HCC among newly diagnosed HCC patients is increasing in the direct-acting antiviral (DAA) era and might be due to preexisting inflammatory and fibrotic liver backgrounds, immune dysregulation between host and virus interactions, as well as host epigenetic scars, genetic predispositions and alternations. By means of applying surrogate markers and adopting risk stratification, HCC surveillance should be consistently performed in high-risk populations. In this review, we discuss the possible molecular mechanism, risk factors, and HCC surveillance strategy for HCC development after HCV eradication in CHC patients.

Citations

Citations to this article as recorded by  Crossref logo
  • Revisiting unmet needs in clinical research on direct-acting antiviral therapy for HCC patients: Correspondence to letter to the editor on “Direct-acting antiviral therapy for patients with HCV-related hepatocellular carcinoma: A nationwide cohort study”
    Teng-Yu Lee, Pei-Chien Tsai, Shou-Wu Lee, Ming- Lung Yu
    Clinical and Molecular Hepatology.2026; 32(1): e99.     CrossRef
  • Hepatitis A to E in People with HIV: A Virus-Specific Review of Prevention and Treatment
    Kuan-Yin Lin, Yi-Chia Huang, Miao-Hui Huang, Tsung-Yu Tsai, Guan-Jhou Chen, Yu-Shan Huang, Sung-Hsi Huang, Hsin-Yun Sun, Chien-Ching Hung
    Infectious Diseases and Therapy.2026; 15(2): 391.     CrossRef
  • Artificial Intelligence Applications in the Diagnosis, Treatment, and Prognosis of Hepatocellular Carcinoma
    Ming-Ying Lu, Jacky Chung-Hao Wu, Henry Horng-Shing Lu, Mohammed Eslam, Ming-Lung Yu
    Gut and Liver.2026; 20(1): 5.     CrossRef
  • Editorial: Beyond Viral Eradication—Cardiometabolic Risk and Cardiovascular Outcomes After SVR in Chronic Hepatitis C. Authors' Reply
    Pei‐Chien Tsai, Jee‐Fu Huang, Ming‐Lung Yu
    Alimentary Pharmacology & Therapeutics.2026; 63(8): 1175.     CrossRef
  • Relative telomer length as a potential biomarker in hepatocellular carcinoma: a comparative study of HCV patients treated with direct antiviral agent
    Marwa Helal, Marwa Gamal, Ashraf A. Basuni, Walaa El Gendy, Ashraf Khalil
    BMC Cancer.2026;[Epub]     CrossRef
  • Predicting non-alcoholic fatty liver disease (NAFLD) using machine learning algorithms: Evidence from a large-scale community cohort in Taiwan
    Tzu-Chun Lin, Yu-Ju Wei, Po-Cheng Liang, Pei-Chien Tsai, Yi-Hung Lin, Meng-Hsuan Hsieh, Tyng-Yuan Jang, Chih-Wen Wang, Ming-Yen Hsieh, Zu-Yau Lin, Ming-Lun Yeh, Jee-Fu Huang, Chung-Feng Huang, Wan-Long Chuang, Ming-Lung Yu, Chia-Yen Dai, Hon-Yi Shi
    BioScience Trends.2026; 20(1): 80.     CrossRef
  • Impact of Cardiometabolic Risk Factors and Steatotic Liver Disease on Liver‐Related Outcomes in Patients With Chronic Hepatitis C After Curative Antiviral Therapy
    Chung‐Feng Huang, Yi‐Hung Lin, Pei‐Chien Tsai, Ming‐Lun Yeh, Chih‐Wen Wang, Tyng‐Yuan Jang, Po‐Cheng Liang, Yu‐Ju Wei, Nai‐Jen Hou, Ming‐Yen Hsieh, Chao‐Kuan Huang, Tzu‐Chun Lin, Jee‐Fu Huang, Chia‐Yen Dai, Wan‐Long Chuang, Ming‐Lung Yu
    The Kaohsiung Journal of Medical Sciences.2026;[Epub]     CrossRef
  • Hepatocellular carcinoma surveillance after sustained virological response in chronic hepatitis C: Editorial on “Non-invasive prediction of post-sustained virological response hepatocellular carcinoma in hepatitis C virus: A systematic review and meta-ana
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    Clinical and Molecular Hepatology.2025; 31(1): 261.     CrossRef
  • Integrative analysis of serum proteomics and transcriptomics in hepatitis C
    Jianqiong Wang, Andong Xia, Min Tang, Shengjun Yang, Yandi Shen, Jinhua Dao, Rui Tao, Wei Yue
    Virology Journal.2025;[Epub]     CrossRef
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    Mohamed El-Far, Ahmed S. Mustafa, AbdelfattahM. Attallah, Mohamed A. Abdelrazek
    Journal of Immunoassay and Immunochemistry.2025; 46(3): 218.     CrossRef
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  • 10,320 View
  • 198 Download
  • 16 Web of Science
  • Crossref