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Roles of X-box binding protein 1 in liver pathogenesis

Clinical and Molecular Hepatology 2025;31(1):1-31.
Published online: October 2, 2024

1College of Pharmacy and Integrated Research Institute for Drug Development, Dongguk University-Seoul, Goyang, Korea

2Department of Clinical Pharmacology and Therapeutics, Seoul National University College of Medicine, Seoul, Korea

3College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Korea

Corresponding author : Sang Geon Kim College of Pharmacy, Dongguk University-Seoul, 32 Dongguk-ro, Ilsandong-gu, Goyang 10326, Korea Tel: +82-31-961-5218, Fax: +82-31-961-5206, E-mail: sgkim@dongguk.edu

Jihoon Tak and Yun Seok Kim contributed equally to this work.


Editor: Sungsoon Fang, Yonsei University College of Medicine, Korea

• Received: June 10, 2024   • Revised: September 6, 2024   • Accepted: September 27, 2024

Copyright © 2025 by The Korean Association for the Study of the Liver

This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/3.0/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

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Roles of X-box binding protein 1 in liver pathogenesis
Clin Mol Hepatol. 2025;31(1):1-31.   Published online October 2, 2024
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Roles of X-box binding protein 1 in liver pathogenesis
Image Image Image Image Image
Figure 1. Three branches of the unfolded protein response. Various stimuli trigger ER stress, causing the accumulation of unfolded or misfolded proteins and activating the UPR. The accumulation of unfolded or misfolded proteins triggers the UPR, causing ER chaperone GRP78 to dissociate from the luminal domains of three ER stress sensors. Upon activation, IRE1α undergoes dimerization and trans-autophosphorylation by activating its endoribonuclease activity and initiating RIDD, which breaks down multiple types of mRNA molecules to reduce protein synthesis. PERK phosphorylates eIF2α, resulting in a decrease in protein translation and phosphorylated-eIF2α selectively increases the translation of ATF4. ATF6, an ER membrane-bound inactive precursor transcription factor, is transported to the Golgi apparatus in COPII-coated vesicles. There, it undergoes proteolytic cleavage by the S1P and S2P, resulting in activation. Activated XBP1s, ATF4, and ATF6 translocate to the nucleus to initiate the transcription of genes encoding ER chaperones or proteins, restoring ER homeostasis or inducing cell death. ATF4, activating transcription factor 4; ATF6, activating transcription factor 6; COPII, coat protein complex II; eIF2α, eukaryotic translation initiation factor 2α; ER, endoplasmic reticulum; GRP78, glucose-regulatory protein 78; IRE1α, inositol-requiring enzyme 1 alpha; PERK, protein kinase RNA-like endoplasmic reticulum kinase; RIDD, regulated IRE1α-dependent decay; S1P, site-1 protease; S2P, site-1 protease; UPR, unfolded protein response; XBP1, X-box binding protein 1.
Figure 2. Implications of the IRE1α/XBP1 pathway based on the different forms of IRE1α complexes. Cell fate is determined by the downstream consequences of ER stress-induced IRE1α activation, including proadaptive XBP1s-dependent transcriptional signaling, RIDD, and JNK pathway activation. IRE1α activation occurs through conformational changes prompted by the dimerization of monomers within the membrane plane, followed by trans-autophosphorylation. Upon additional stress stimuli, higher-order oligomers may form, enhancing IRE1α RNase activity. Activated IRE1α facilitates the splicing of XBP1 mRNA in normal cells under mild ER stress and cancer cells under chronic ER stress. The removal of an intron from the XBP1 transcript induces frame-shift, leading to the synthesis of a potent transcription factor, XBP1-spliced, which regulates numerous UPR target genes for survival. Otherwise, IRE1α activation by dimerization induces degradation and translational attenuation in the RIDD pathway to promote cell death or phosphorylated IRE1α with oligomer that is the conformational change from IRE1α dimer. IRE1α oligomer interacts with TRAF2 and thereby activates the JNK pathway via ASK1, ultimately leading to cell death in normal cell under chronic ER stress. ASK1, apoptosis signal-regulating kinase 1, ER, endoplasmic reticulum; IRE1α, inositol-requiring enzyme 1 alpha; JNK, c-Jun N-terminal kinase; RIDD, regulated IRE1α-dependent decay; TRAF2, tumor necrosis factor receptor-associated factor 2; UPR, unfolded protein response; XBP1, X-box binding protein 1.
Figure 3. Regulation of target gene transcription by XBP1. XBP1 modulates various cellular processes by regulating the transcription of numerous target genes. XBP1 regulates cell proliferation, affects glucose and lipid metabolism, and induces tumor formation and growth. XBP1, X-box binding protein 1.
Figure 4. Activation of apoptosis, necroptosis, pyroptosis, and ferroptosis regulated by XBP1s. The pathway of ER stress-induced apoptosis is activated not only by IRE1α, which initiates the TRAF2-ASK1-JNK inflammatory/oxidative stress pathway, but also by the CHOP pathway, facilitated by XBP1s. Similarly, PHLDA3 induction by XBP1s exacerbates apoptosis by suppressing p-AKT. Overexpression of XBP1s promotes necrotic cell death; XBP1s activates the CHOP and downstream protein NLRP3, resulting in caspase-1 activation and pyroptosis. XBP1s mediates ferroptosis by inducing Gα12 overexpression through enhanced ROCK1 via dysregulated ALOX12, miR-15a, and GPX4, facilitating lipid peroxidation. AKT, serine/threonine protein kinase B; ALOX12, arachidonate 12-lipoxygenase; ASK1, apoptosis signal-regulating kinase 1; CHOP, CCAAT-enhancer-binding protein homologous protein; ER, endoplasmic reticulum; Gα12, G protein subunit alpha 12; GPX4, glutathione peroxidase 4; IRE1α, inositol-requiring enzyme 1 alpha; JNK, c-Jun N-terminal kinase; miR-15a, microRNA-15a; NLRP3, nucleotide-binding domain, leucine-rich–containing family, pyrin domain–containing-3; PHLDA3, pleckstrin homology-like domain, family A, member-3; RIDD, regulated IRE1α-dependent decay; ROCK1, rho associated coiled-coil containing protein kinase 1; TRAF2, tumor necrosis factor receptor-associated factor 2; UPR, unfolded protein response; XBP1, X-box binding protein 1.
Figure 5. Overview of the roles of XBP1s in drug-induced liver injury and viral hepatitis. (A–D) The induction of XBP1s by APAP causes hepatotoxicity via phosphorylation of JNK1/2, which is recovered by STF-083010 (A). Efavirenz, an anti-HIV drug, exacerbates hepatotoxicity by increasing XBP1s (B). Anti-depression drugs, sertraline, and nefazodone aggravate cytotoxicity in the liver through XBP1s overexpression, which is restored by 4-phenylbutyrate (4-PBA) (C). Anti-type 2 diabetes drugs including rosiglitazone and fenofibrate increase XBP1s levels and regulate lipid accumulation (D). (E, F) HBV augments EDEM through the IRE1α-XBP1 pathway (E). HCV increases XBP1s and PHLDA3 expression (F). HCV also can inhibit XBP1s trans-activating activity, suppressing EDEM (F). 4-PBA, 4-phenylbutyrate; EDEM, ER degradation-enhancing-mannosidase-like protein; HBV, hepatitis B virus; HCV, hepatitis C virus; HIV, human immunodeficiency virus; IRE1α, inositol-requiring enzyme 1 alpha; JNK, c-Jun N-terminal kinase; PHLDA3, pleckstrin homology-like domain, family A, member-3; XBP1, X-box binding protein 1.
Roles of X-box binding protein 1 in liver pathogenesis
Diseases Directionality Mechanism/Target Ref.
MASLD Aggravation SIRT6 ↓ [80],
Deacetylation of XBP1s ↓ [231]
Amount of XBP1 ↑
Lipogenic genes ↑ [27],
Insulin resistance ↑ [75]
Improvement VLDL assembly/secretion ↑ [96],
Hepatic TG accumulation ↓ [224]
miR-200/miR-24 ↓ [225]
PPARα/SIRT1 ↑
FGF21 ↑ [103]
eIF2α-ATF4-CHOP pathway ↓
Hepatic FA synthesis rate ↓ [226]
Lipolysis ↑
CHOP/JNK ↓ [227]
Circadian rhythms ↑ [243-245]
Fibrosis/Cirrhosis Aggravation TGF-β ↑ [260]
XBP1s ↑
Autophagy ↑ [209]
TGF-β ↑ [262]
HSCs activation ↑
BNIP3 ↓ [263]
Mitophagy ↓
HSCs activation ↑
AT2R ↓ [265]
XBP1s ↑
ERAD machinery ↑ [267]
Nrf2↓
Improvement JNK ↓ [230]
Apoptosis ↓
Liver damage ↓
CHOP/JNK ↓ [266]
TGF-β/Collagen ↓
HCC Aggravation GRP78 ↑ [275]
STAT3 ↑ [277],
Cell proliferation ↑ [278]
RACK1 ↑ [279]
XBP1s ↑
Apoptosis ↓
LEF1 ↑ [280]
WNT signaling ↑
Twist/Snail ↑ [105],
EMT ↑ [281]
Invasion/Metastasis ↑
p-AKT ↑ [282]
Oxidative stress ↓
FoxO1 ↓ [283]
Persistent activation of autophagy ↓
Survival ↑
p53 ↓ [93]
Tumorigenesis ↑
SREBP2 stability ↑ [284]
Cholesterol ↑
Survival ↑
miR-21 ↑ [285]
M2 polarization ↑
miR-199 ↓ [286]
XBP1s ↑
Cyclin D ↑
Proliferation ↑
Improvement ROS ↑ [95]
XBP1s ↑
HEPN1 ↑
Apoptosis ↑
Diseases Drugs Function Model Pharmacological Effect
DILI STF-083010 Blocking TAA Reduces oxidative stress, inflammation, and liver injury [294]
XBP1 splicing
STF-083010 Blocking APAP Mitigates APAP-induced liver injury and activates autophagy [145]
XBP1 splicing
MASLD IXA4 XBP1s-selective pharmacological HFD Improves systemic glucose metabolism and liver insulin action [302]
IRE1 activator
APY-29 Activation of HepG2 cells with FFA Increases the VLDL level [295]
XBP1 splicing
STF-083010 Blocking HepG2 cells with FFA Decreases the VLDL level [295]
XBP1 splicing
4µ8C Blocking FFC diet Reduces hepatic inflammation, ALT, macrophage accumulation, and cell death [296]
XBP1 splicing
Fibrosis/Cirrhosis Toyocamycin Blocking HFD feeding Prevents hepatic steatosis, inflammation, and fibrosis in mice [262]
XBP1 splicing
Toyocamycin Blocking CCl4, BDL, and MCD Inhibits the STING pathway and NLRP3 activation, suppresses oxidative stress, and attenuates liver fibrosis in mice [263]
XBP1 splicing
4µ8C Blocking CCl4 Suppresses CCl4-induced elevation of ALT and restores normal liver [267] morphology
XBP1 splicing
4µ8C Blocking CCl4 Reduces fibrosis and decreases the liver‐to‐ body weight ratio [297]
XBP1 splicing
STF-083010 Blocking CCl4 Attenuates α-SMA, HSCs activation, and inflammatory cytokines [298]
XBP1 splicing
HCC 4µ8C Blocking DEN Prevents chemoresistance and decreases stellate cell activation [299]
XBP1 splicing
4µ8C Blocking DEN Reduces tumor burden and collagen deposition [300]
XBP1 splicing
Table 1. Functional roles of XBP1s for the processes of MASLD, Fibrosis/Cirrhosis, and HCC

ATF4, activating transcription factor 4; AT2R, angiotensin II receptor type 2; BNIP3, Bcl-2 interacting protein 3; CHOP, CCAAT-enhancer-binding protein homologous protein; EMT, epithelial-mesenchymal transitions; ERAD, endoplasmic-reticulum-associated protein degradation; FA, fatty acid; FGF21, fibroblast growth factor 21; FoxO1, forkhead box protein O1; GRP78, glucose-regulated protein 78; HCC, hepatocellular carcinoma; HEPN1, hepatocellular carcinoma downregulated 1; HSCs, hepatic stellate cells; JNK, c-Jun N-terminal kinase; LEF1, lymphoid enhancer binding factor 1; MASLD, metabolic dysfunction-associated steatotic liver disease; Nrf2, nuclear factor erythroid 2-related factor 2; PPAR, peroxisome proliferator-activated receptors; RACK1, receptor for activated C kinase 1; SIRT1, sirtuin-1; SIRT6, sirtuin-6; SREBP2, sterol regulatory element-binding protein 2; STAT3, signal transducer and activator of transcription 3; TG, triglyceride; TGF-β, transforming growth factor beta; VLDL, very-low-density lipoprotein; WNT, wingless/int1; XBP1, X-box binding protein 1.

Table 2. IRE1α–XBP1 modulating drugs for liver diseases

ALT, alanine aminotransferase; APAP, acetaminophen; BDL, bile duct ligation; CCl4, carbon tetrachloride; DEN, diethylnitrosamine; DILI, drug-induced liver injury; FFA, free fatty acid; FFC, high fat, fructose, and cholesterol; HCC, hepatocellular carcinoma; HFD, high-fat diet; HSCs, hepatic stellate cells; MCD, methionine/choline-deficient diet; MASLD, metabolic dysfunction-associated steatotic liver disease; MASH, metabolic dysfunction-associated steatohepatitis; NLRP3, NLR family pyrin domain containing 3; α-SMA, α-smooth muscle actin; STING, stimulator of interferon genes; TAA, thioacetamide; VLDL, very low-density lipoprotein; XBP1, X-box binding protein.